National Institute of Technology Rourkela

राष्ट्रीय प्रौद्योगिकी संस्थान राउरकेला

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Syllabus

Course Details

Subject {L-T-P / C} : CY5201 : Bioinorganic Chemistry { 3-1-0 / 4}

Subject Nature : Theory

Coordinator : Rabindra Kumar Behera

Syllabus

Module 1 :

Module # 1
Introduction: (2-3 hours)
• Introduction to Bio-inorganic Chemistry
• Metal ions essential for biological functions: The Inorganic Side of Life
• Basic coordination chemistry in biology: Biological ligands for metal ions.
• Metal ion specificity/selectivity.
Ion-transport and Signal transduction: (4 hours)
• Ion (Na+ and K+) transport: Ion Channels & Pump, Ionophore, Action Potential
• Ca2+: Cell Signalling (Calmodulin) and Heart Pumping (Troponin C)
• Mg2+: ATP Hydrolysis

Module # 2
O2 storage and transport: (4 hours)
• Myoglobin/Hemoglobin and Hemocyanin (Cu)/Hemerythrin [Resonance Raman Spectra]
O2 activation and toxicity/detoxification: (3 hours)
• Cytochrome P450, Peroxidase, Catalase, Super Oxide Dismutase (SOD)
Fe transport, storage and acquisition: Transferrin, Ferritin and Siderophore (2 hours)

Module # 3
Electron Transfer: Cytochromes, Fe-S Cluster, and Plastocyanin (Cu) Marcus Theory (2 hours)
Copper Proteins (Types): Electron transport and O2 activation (1 hour)
ATP Synthesis: Photosynthesis, and Respiration: Cytochrome C Oxidase (Fe & Cu) (4 hours)
Nitrogen Fixation: Nitrogenase (Fe & Mo) (1 hour)

Module # 4
Zn2+ (Lewis Acidity): Carbonic Anhydrase, Carboxy Peptidases, ADH and Zinc Finger protein (2 hours)
Group Transfer and Pernicious/Megaloblastic Anaemia: Vitamin B12 (Co) (1-2 hours)

Module # 5
Metals in Health: (3 hours)
• Metal toxicity: Mercury and Arsenic Metals in Diagnosis: Gd, Fe Metals in Treatments: Pt, Au
Methods in Bio-inorganic Chemistry: (4 hours)
• Resonance Raman, Mössbauer and EPR Spectroscopy, Cyclic Voltammetry, Site-Directed Mutagenesis

Course Objective

1 .

To study the “Inorganic Side of Life”.

2 .

To study the “Metal ion Selectivity” by nature in molecules of life.

3 .

To study how metalloenzymes achieve extraordinary reactivity by suitable primary/secondary coordination environment.

Course Outcome

1 .

CO 1: It provides idea about essentiality of inorganic element required for life and their bioavailability.
CO2: It teaches about – how metalloproteins select a metal ion (over another) for its structure/activity.
CO3: The course provides the insight about - how metalloenzymes functions (i.e. mechanism – structure/activity relationship) to regulate further for potential applications.
CO4: It provides information about the metal ions associated with physiology and pathophysiology (Metal ions in functionality/toxicity to diagnosis to treatment).
CO5: It provides a brief idea about the analytical methods to study the metal coordination/binding site and reactivity.

Essential Reading

1 .

Bertini, I. Gray, H. B. Stiefel, E. I. Valentine, J. S., Biological Inorganic Chemistry: Structure and Reactivity, University Science Books , 2007

2 .

Robert Chrichton, Biological Inorganic Chemistry: A New Introduction to Molecular Structure and Function, , Elsevier , 2012

Supplementary Reading

1 .

Wolfgang Kaim and Axel Klein, Bio-inorganic Chemistry, Wiley , 2013

2 .

L. Que. Jr., Physical Methods in Bioinorganic Chemistry, University Science Books

Journal and Conferences

2 .

Video Lectures by Dr. R.K. Behera A.N. Koshla Center for Technology Enabled Learning: https://ankctel.nitrkl.ac.in/lecture/13

1 .

JBIC, Metallomics, JBC, JIB